GeneID = 284379 is in our transporter list.
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  • Gene general annotation
  • Data comes from NCBI-Gene
    Entrez GeneID 284379
    Gene Symbol LOC284379
    Description solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 pseudogene
    Organism Homo sapiens
    Location 19q13.42
    Genomic position NC_000019.9 54102886-54106750 minus strand (Reference GRCh37.p5 Primary Assembly) U E
  • KOBAS Annotation (Pathway/Disease Annotation)
  • PharmacoGenetics Related Genes/Drugs/Diseases
  • TaxicoGenetics Related Chemicals/Diseases/Pathways
  • Known Drugs in DrugBank
  • Transporter Substrate Information
  • Genomic Variation --- SNP
  • Data is integrated from dbSNP and HapMap, with functionally annotated by ANNOVAR
    Note: heterozygosity is not actually estimated from 1KG data, but is put in the same line for more compact representation.
    dbSNP rsIDchrpositionpop.alleleallele countfrequencyHapMap pop. diff.genotypegenotype count (frequency) functional annotation
    rs6509799 19 54103136 CEU G / A 113 / 17 FET lg p = -12.06

    max diff AF = 0.367
    G/G / A/G / A/A 50 / 13 / 2 ncRNA_exonic: LOC284379
    CHB 50 / 38 14 / 22 / 8
    JPT 55 / 33 18 / 19 / 7
    YRI 116 / 8 54 / 8 / 0
    1KG A (minor)432 in 2178 = 0.19835 heterozygosity = 0.31801, with SE = 0.24057
    rs7250277 19 54104943 1KG C (minor)967 in 2178 = 0.44399 heterozygosity = 0.49373, with SE = 0.05566 ncRNA_intronic: LOC284379
    rs7249437 19 54104982 1KG T (minor)15 in 2178 = 0.00689 heterozygosity = 0.01368, with SE = 0.08156 ncRNA_intronic: LOC284379
    rs7250397 19 54105015 1KG C (minor)533 in 2178 = 0.24472 heterozygosity = 0.36966, with SE = 0.21950 ncRNA_intronic: LOC284379
    rs1541925 19 54106547 ASW G / A 53 / 61 FET lg p = -18.75

    max diff AF = 0.362
    G/G / A/G / A/A 12 / 29 / 16 ncRNA_intronic: LOC284379
    CEU 160 / 66 56 / 48 / 9
    CHB 151 / 123 50 / 51 / 36
    CHD 115 / 103 28 / 59 / 22
    GIH 133 / 67 50 / 33 / 17
    JPT 131 / 91 37 / 57 / 17
    LWK 103 / 115 20 / 63 / 26
    MEX 70 / 44 23 / 24 / 10
    MKK 207 / 105 73 / 61 / 22
    TSI 120 / 84 36 / 48 / 18
    YRI 101 / 191 18 / 65 / 63
    1KG A (minor)865 in 2178 = 0.39715 heterozygosity = 0.47885, with SE = 0.10065
    Limited to 5 records in this page. Click here to view more.
  • Genomic Variation --- CNV
  • Haplotype Information
  • Data links to UCSC Genome Browser
    ContentHyperlinkDemo example
    HapMap LD Structure (hg18)UCSC
    1000 Genomes Phase I Haplotype Clustering (hg19)UCSC
    Gene Haplotype Allele (hg19)UCSC
  • ENCODE TFBS (Transcription Factor Binding Sites) Information
  • Epigenetic Information
  • Gene Ontology (GO)
  • Protein Sequence & Features
  • Protein Domain Information
  • Protein-Protein Interaction
  • UniGene EST Expression Data
  • Allen Brain Atlas - Mouse Brain Expression Data
  • RNA-seq Expression Data
  • External Links
  • EntrezGeneID 284379
    Gene Symbol and
    Genome Browser
    LOC284379
    UCSC Ensembl
    mRNA NR_002938
    UniGene Hs.631571